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The Joint Danube Survey 2001 was carried out by the ICPDR and is the most homogenous analysis of the water quality and the ecological status of the Danube River. Over 140 chemical and biological parameters were analysed and over 40.000 laboratory results were generated.

The floodplains and wetlands of the Danube basin are uniquely valuable ecosystems in global terms, although few areas are still in their natural or near-natural state.

Since the 16th century, people have been changing the natural course of the rivers in the Danube River Basin, mainly for flood defence, hydropower generation and navigation. All these changes affect the ecological quality of the rivers. Changes in the depth or width of a river typically reduce flow rates, interrupting natural sediment transportation as well as the migration routes of animals.