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Three sub-basins of the Danube are partly located in Ukraine - the Tisza, Prut and Siret basins, as well as part of the Danube Delta. Furthermore, 2.7 million people live in the Ukrainian part of the Danube Basin, which is 3.3% of the total Danube Basin District. Ukraine has been a Signatory State to the Danube River Protection Convention since 1994. The Convention was ratified by the Ukrainian Parliament in 2002.

The Czech Republic is situated at the roof of Europe and its waters are drained through rivers into three different seas. The majority of the territory is drained by the Elbe and Oder to the North and Baltic Seas. The Morava River drains almost 28 % of the country to the Danube. Nearly 2.8 million inhabitants – around 3.46 % of the population in the Danube River Basin – live in this area.

As both the largest remaining natural wetland and second largest river delta in Europe, the Danube Delta is one of the continent's most valuable habitats for wetland wildlife. Pollution and discharge manipulation from upstream has a huge effect on this area of high biodiversity, plus the delta continues to change ecologically itself – the Danube Delta spreads seaward at a rate of 10 to 25 metres every year.

Covering an area of 157,186 km², the Tisza River Basin is the largest sub-basin of the Danube River Basin. The Tisza River is the longest tributary of the Danube (966 km), and second largest in terms of flow after the Sava. The countries of the Tisza Basin (Ukraine, Romania, Hungary, Slovakia, Serbia) agreed to close transboundary co-operation, aiming to achieve integrated water resources management of the Basin.